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Intron Name: Anas_platyrhynchos_platyrhynchos_28_707929_708861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

707929 - 708861

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTCCC

5'SS Class:

major

3'SS Sequence:

GCACCTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAC

U12 Branch Point Sequence:

TAGCTCTGCACC

Flanking Amino Acid:

FMILLSSGALAFEDIYIEQR

Intron Amino Acid Position:

989

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

62.9

39.7

Major BPS

52.5

0.06

1.4

65.3

41.6

Major PPT

71.6

0.49

0.9

61.5

39.8

Minor 5ss

34.2

-1.8

3.1

38.9

Minor BPS

46.8

-0.2

1.9

57.58

40.8

Associated Gene:

Gene:

SCN4A

Ensembl Gene ID:

ENSAPLG00000004906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005205

683340 - 716182

32843