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Intron Name: Anas_platyrhynchos_platyrhynchos_28_709036_709555_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

709036 - 709555

Intron Length:

520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GCACTGCTAACT

Flanking Amino Acid:

WCWLDFLIVDVSIVSLTANW

Intron Amino Acid Position:

1047

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

78.5

0.64

0.8

69.3

36.9

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

43.3

-0.4

2.2

59.42

43.4

Associated Gene:

Gene:

SCN4A

Ensembl Gene ID:

ENSAPLG00000004906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005205

683340 - 716182

32843