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Intron Name: Anas_platyrhynchos_platyrhynchos_28_710198_711543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

710198 - 711543

Intron Length:

1346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTACGTACA

5'SS Class:

major

3'SS Sequence:

TCTGTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

GCCTCCTGATGA

Flanking Amino Acid:

GLGYLSLLQVATFKGWMDIM

Intron Amino Acid Position:

1181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

73.5

Major BPS

78.8

0.71

67.6

40.6

Major PPT

80.2

0.68

0.8

73.8

31.3

Minor 5ss

35.1

-1.7

2.8

40.3

40.4

Minor BPS

45.4

-0.3

52.51

45.4

Associated Gene:

Gene:

SCN4A

Ensembl Gene ID:

ENSAPLG00000004906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005205

683340 - 716182

32843