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Intron Name: Anas_platyrhynchos_platyrhynchos_28_711598_712811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

711598 - 712811

Intron Length:

1214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCTGGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

CATCTCTTATTT

Flanking Amino Acid:

IMYAAVDSREIEEQPSYEIN

Intron Amino Acid Position:

1199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

63.3

0.3

1.1

43.3

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

56.2

0.27

1.6

69.92

41.4

Associated Gene:

Gene:

SCN4A

Ensembl Gene ID:

ENSAPLG00000004906

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005205

683340 - 716182

32843