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Intron Name: Anas_platyrhynchos_platyrhynchos_28_730359_731902_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

730359 - 731902

Intron Length:

1544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTTTGTAAC

5'SS Class:

weak_major

3'SS Sequence:

TTTTTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTTTTTTAATT

Flanking Amino Acid:

QQSFLRQKSIDMELLRFSLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.2

60.9

37.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.6

0.87

0.8

86.6

31.3

Minor 5ss

-1

2.5

52.7

38.3

Minor BPS

71.6

0.76

1.2

78.3

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027944

730323 - 733402

3080