Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_730725_731425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

730725 - 731425

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

GATGTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAGAT

U12 Branch Point Sequence:

GATGTCTCCACA

Flanking Amino Acid:

LLAAETYKEFERSYIPEDQR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.3

72.3

37.7

Major BPS

57.5

0.19

52.7

34.2

Major PPT

69.2

0.43

0.9

61.5

39.8

Minor 5ss

38.8

-1.3

3.3

53.2

38.5

Minor BPS

45.6

-0.3

57.03

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004693

730502 - 733402

2901