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Intron Name: Anas_platyrhynchos_platyrhynchos_28_738209_739679_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

738209 - 739679

Intron Length:

1471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

TACTCTTGGATT

Flanking Amino Acid:

TEEELKGLVQVNELPLEQFD

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

74.4

Major BPS

0.5

0.9

61.4

35.9

Major PPT

84.4

0.77

0.7

77.3

31.4

Minor 5ss

32.2

-2

40.3

45.3

Minor BPS

58.5

0.35

1.4

72.1

39.4

Associated Gene:

Gene:

RDM1

Ensembl Gene ID:

ENSAPLG00000004384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004535

733202 - 739812

6611