Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_767829_768171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

767829 - 768171

Intron Length:

343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGGGGA

5'SS Class:

major

3'SS Sequence:

CGCTGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAAGCAT

U12 Branch Point Sequence:

CAAGCATCACCT

Flanking Amino Acid:

GYPEHFGTETVPAGSRQHRA

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

Major BPS

47.3

-0.1

1.4

55.4

40.3

Major PPT

67.3

0.39

0.9

57.5

38.6

Minor 5ss

35.2

-1.7

3.5

46.1

49.1

Minor BPS

41.7

-0.5

55.44

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004226

762805 - 768903

6099