Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_773115_773290_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

773115 - 773290

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGTGGGAC

5'SS Class:

major

3'SS Sequence:

GCTGTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGACAC

U12 Branch Point Sequence:

GCCAGGGTGACA

Flanking Amino Acid:

PSSWKCPNPQDCGNATCVEV

Intron Amino Acid Position:

861

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

66.8

39.2

Major BPS

-0.2

1.3

52.4

43.3

Major PPT

70.2

0.45

61.9

39.9

Minor 5ss

19.8

-3.5

30.5

43.7

Minor BPS

32.8

-1.3

2.6

38.93

40.8

Associated Gene:

Gene:

ITGA2B

Ensembl Gene ID:

ENSAPLG00000003235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003373

772393 - 779107

6715