Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_778495_778563_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

778495 - 778563

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGGGTGCA

5'SS Class:

major

3'SS Sequence:

TCCCCGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCCCAC

U12 Branch Point Sequence:

GGGCGCCCACCT

Flanking Amino Acid:

SVTSWHGTLVACAPLQHWNA

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

63.8

36.3

Major BPS

-0.3

1.2

47.5

37.7

Major PPT

69.7

0.44

0.8

60.6

35.2

Minor 5ss

26.3

-2.7

3.2

28.7

38.5

Minor BPS

35.2

-1

2.1

48.19

43.8

Associated Gene:

Gene:

ITGA2B

Ensembl Gene ID:

ENSAPLG00000003235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003373

772393 - 779107

6715