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Intron Name: Anas_platyrhynchos_platyrhynchos_28_778654_778740_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

778654 - 778740

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACT|GCGGGTGCG

5'SS Class:

weak_major

3'SS Sequence:

TCCAGGGGATGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCCAG

U12 Branch Point Sequence:

TGTTCTTCCAGG

Flanking Amino Acid:

SSCDPVPFDTMETSSSMKLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.4

57.1

39.1

Major BPS

46.4

-0.2

1.7

61.8

44.5

Major PPT

41.3

-0.5

1.7

38.7

43.4

Minor 5ss

18.8

-3.6

3.9

32.4

42.3

Minor BPS

-0.5

2.2

55.88

45.6

Associated Gene:

Gene:

ITGA2B

Ensembl Gene ID:

ENSAPLG00000003235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003373

772393 - 779107

6715