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Intron Name: Anas_platyrhynchos_platyrhynchos_28_800903_802955_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

800903 - 802955

Intron Length:

2053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GTTCCTGTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

82.5

30.8

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

78.8

0.65

0.9

Minor 5ss

46.3

-0.4

2.8

64.2

42.3

Minor BPS

47.5

-0.2

2.3

65.47

40.6

Associated Gene:

Gene:

GPATCH8

Ensembl Gene ID:

ENSAPLG00000003095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026642

782680 - 811957

29278

ENSAPLT00000020446

780344 - 803000

22657