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Intron Name: Anas_platyrhynchos_platyrhynchos_28_803001_811857_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

803001 - 811857

Intron Length:

8857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGAGT

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

TTCTGCCTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.2

73.4

43.3

Major BPS

60.7

0.27

65.3

28.1

Major PPT

94.8

1.01

0.6

90.9

21.3

Minor 5ss

39.5

-1.2

3.2

57.9

46.4

Minor BPS

0.28

2.1

75.88

41.5

Associated Gene:

Gene:

GPATCH8

Ensembl Gene ID:

ENSAPLG00000003095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026642

782680 - 811957

29278