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Intron Name: Anas_platyrhynchos_platyrhynchos_28_871217_873095_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

871217 - 873095

Intron Length:

1879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCACTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

TTCTTCCCCACT

Flanking Amino Acid:

TKRYQEALQLGSQLLRELKK

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

81.3

32.8

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

61.3

0.25

0.9

54.4

35.5

Minor 5ss

33.3

-1.9

43.8

43.9

Minor BPS

46.5

-0.1

2.2

72.26

44.7

Associated Gene:

Gene:

PSMD11

Ensembl Gene ID:

ENSAPLG00000002804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002860

860640 - 880051

19412