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Intron Name: Anas_platyrhynchos_platyrhynchos_28_874397_875986_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

874397 - 875986

Intron Length:

1590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGAAA

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CTTCTCTCATTT

Flanking Amino Acid:

KLALRYAGRQTEALKCVAQA

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

68.2

38.4

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

92.4

0.95

0.6

88.1

21.7

Minor 5ss

29.5

-2.3

3.4

38.5

46.8

Minor BPS

49.1

0.01

1.8

68.97

42.5

Associated Gene:

Gene:

PSMD11

Ensembl Gene ID:

ENSAPLG00000002804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002860

860640 - 880051

19412