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Intron Name: Anas_platyrhynchos_platyrhynchos_28_876050_876639_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

876050 - 876639

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

ACTACCTGAGTG

Flanking Amino Acid:

KNRSLADFEKALTDYKVELR

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

80.3

0.68

0.9

77.5

36.9

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

47.4

-0.3

1.8

51.56

42.9

Associated Gene:

Gene:

PSMD11

Ensembl Gene ID:

ENSAPLG00000002804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002860

860640 - 880051

19412