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Intron Name: Anas_platyrhynchos_platyrhynchos_28_876766_877337_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

876766 - 877337

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTCTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATTTATTTAACT

Flanking Amino Acid:

RVIEPFSRVQIEHISSLIKL

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.7

0.65

0.8

73.1

31.2

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

78.3

0.97

1.3

91.5

30.9

Associated Gene:

Gene:

PSMD11

Ensembl Gene ID:

ENSAPLG00000002804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002860

860640 - 880051

19412