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Intron Name: Anas_platyrhynchos_platyrhynchos_28_879665_879794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

879665 - 879794

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TTCCTCTCGATT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

67.6

0.44

1.2

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

54.4

0.22

1.5

72.13

39.3

Associated Gene:

Gene:

PSMD11

Ensembl Gene ID:

ENSAPLG00000002804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002860

860640 - 880051

19412