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Intron Name: Anas_platyrhynchos_platyrhynchos_28_887706_887800_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

887706 - 887800

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

CTTCTTCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

CACTTCTTCACG

Flanking Amino Acid:

YPLKPFLVESCLRRPQEGER

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.2

57.7

46.6

Major BPS

77.5

0.68

79.6

Major PPT

77.4

0.62

0.8

73.3

30.5

Minor 5ss

34.6

-1.8

3.3

49.6

46.4

Minor BPS

51.9

-0

1.9

55.35

46.1

Associated Gene:

Gene:

CDK5R1

Ensembl Gene ID:

ENSAPLG00000020487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029254

886982 - 888603

1622