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Intron Name: Anas_platyrhynchos_platyrhynchos_28_887869_889040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

887869 - 889040

Intron Length:

1172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

TTCGTGTGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTCGTGTGCACA

Flanking Amino Acid:

EKGRLLIGLDRSSLVLVHRS

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

60.6

38.8

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

69.2

0.43

63.7

41.8

Minor 5ss

32.6

-2

3.3

43.1

44.2

Minor BPS

39.9

-0.8

2.4

54.77

44.5

Associated Gene:

Gene:

CDK5R1

Ensembl Gene ID:

ENSAPLG00000020487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035664

886982 - 889535

2554