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Intron Name: Anas_platyrhynchos_platyrhynchos_28_889170_889426_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

889170 - 889426

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTACGTACG

5'SS Class:

major

3'SS Sequence:

CATTACACGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

ATTAAATAAAAT

Flanking Amino Acid:

AVHWNLLIIHVVSWRSLFCS

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.2

59.4

45.2

Major BPS

73.5

0.58

79.3

29.4

Major PPT

61.5

0.26

1.1

55.8

39.4

Minor 5ss

-1.5

2.9

43.2

Minor BPS

44.6

-0.3

2.1

67.22

42.5

Associated Gene:

Gene:

CDK5R1

Ensembl Gene ID:

ENSAPLG00000020487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035664

886982 - 889535

2554