Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_981583_985570_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

981583 - 985570

Intron Length:

3988

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTAATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CATTTGTAAATT

Flanking Amino Acid:

YRQTYEKFLHRYKMISEFTW

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

76.6

0.6

0.9

66.9

42.9

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

47.3

-0.1

2.3

67.77

43.9

Associated Gene:

Gene:

MYO1D

Ensembl Gene ID:

ENSAPLG00000005131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041476

946819 - 1012777

65959

ENSAPLT00000023026

890864 - 1048509

157646

ENSAPLT00000005349

892226 - 1014247

122022