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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1001919_1005420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1001919 - 1005420

Intron Length:

3502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TTTTCCTTTAAG

Flanking Amino Acid:

VGSPGCQVAKQHVHDGRKEN

Intron Amino Acid Position:

1026

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

86.8

22.8

Major BPS

71.6

0.54

33.1

Major PPT

0.74

0.9

87.8

22.9

Minor 5ss

43.6

-0.7

2.9

58.5

40.4

Minor BPS

68.6

0.44

1.8

77.1

39.8

Associated Gene:

Gene:

REXO1

Ensembl Gene ID:

ENSAPLG00000011954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030954

970473 - 1009888

39416

ENSAPLT00000012460

976552 - 1009888

33337