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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1005532_1005905_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1005532 - 1005905

Intron Length:

374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGGTTCC

5'SS Class:

major

3'SS Sequence:

TTGTCACTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TGCTTTGTCACT

Flanking Amino Acid:

PGIYALDCEMCYTKQGLELT

Intron Amino Acid Position:

1063

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

64.6

36.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

80.5

0.69

0.9

74.3

35.4

Minor 5ss

34.8

-1.7

3.1

40.9

40.8

Minor BPS

45.6

-0.2

2.3

67.13

44.4

Associated Gene:

Gene:

REXO1

Ensembl Gene ID:

ENSAPLG00000011954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030954

970473 - 1009888

39416

ENSAPLT00000012460

976552 - 1009888

33337