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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1006022_1006200_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1006022 - 1006200

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTACACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TGCTCTTACACT

Flanking Amino Acid:

PDTKVVDYNTRFSGVTEEDL

Intron Amino Acid Position:

1101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

69.2

0.48

37.1

Major PPT

77.6

0.62

0.9

70.9

34.3

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

49.9

0.08

2.1

71.8

45.5

Associated Gene:

Gene:

REXO1

Ensembl Gene ID:

ENSAPLG00000011954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030954

970473 - 1009888

39416

ENSAPLT00000012460

976552 - 1009888

33337