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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1006340_1008892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1006340 - 1008892

Intron Length:

2553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCGC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCCTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

GGAAAATAAACA

Flanking Amino Acid:

SLESDLFALKLIHGTVVDTA

Intron Amino Acid Position:

1148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

42.1

Major BPS

0.3

62.3

30.4

Major PPT

79.2

0.66

0.8

69.9

36.6

Minor 5ss

34.6

-1.7

2.9

45.3

42.6

Minor BPS

41.9

-0.6

49.49

40.1

Associated Gene:

Gene:

REXO1

Ensembl Gene ID:

ENSAPLG00000011954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030954

970473 - 1009888

39416

ENSAPLT00000012460

976552 - 1009888

33337