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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1009014_1009722_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1009014 - 1009722

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGATGA

5'SS Class:

major

3'SS Sequence:

TTTCTGTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACGTAAC

U12 Branch Point Sequence:

GGGGACGTAACT

Flanking Amino Acid:

DYLKRIIQDNVEGHDSSEDA

Intron Amino Acid Position:

1188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

65.1

37.3

Major BPS

53.1

0.08

1.2

55.3

37.9

Major PPT

80.8

0.69

0.8

73.1

37.3

Minor 5ss

32.3

-2

39.1

46.1

Minor BPS

45.5

-0.2

2.2

62.35

Associated Gene:

Gene:

REXO1

Ensembl Gene ID:

ENSAPLG00000011954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030954

970473 - 1009888

39416

ENSAPLT00000012460

976552 - 1009888

33337