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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1023543_1024007_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1023543 - 1024007

Intron Length:
465

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATT|GTGAGTATG

5'SS Class:
major

3'SS Sequence:
TGCCTTTGTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGCT

U12 Branch Point Sequence:
TTTTGCTTGCCT

Flanking Amino Acid:
RALRDLIDDIGRHQSDRNIN

Intron Amino Acid Position:
121

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1
72.6
38.2

Major BPS
38.1
-0.7
4.3
71.4
45.1

Major PPT
76.6
0.6
0.9
72.1
37.9

Minor 5ss
36.5
-1.5
2.9
48.4
41.7

Minor BPS
47.1
-0.1
3.7
87.04
39.2

Associated Gene:

Gene:
ATP8B3

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1021039 - 1037084
16046

1021039 - 1037084
16046