Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_1027002_1027114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1027002 - 1027114

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TTCCCCATCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

GGTTCCCCATCT

Flanking Amino Acid:

DRMMDRLVIIIFLVLLAMSL

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

70.5

33.3

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

76.2

0.59

0.8

73.6

29.8

Minor 5ss

34.8

-1.7

3.2

43.2

Minor BPS

47.8

-0

2.1

71.23

44.8

Associated Gene:

Gene:

ATP8B3

Ensembl Gene ID:

ENSAPLG00000012087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037466

1021039 - 1037084

16046

ENSAPLT00000012667

1021039 - 1037084

16046