Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_1027309_1027988_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1027309 - 1027988

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGAACG

5'SS Class:

major

3'SS Sequence:

TCTCACTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CTTTCTTCCATT

Flanking Amino Acid:

SIIIPMSMYITFEFIYLVNS

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.3

41.8

Major BPS

0.87

0.8

85.6

Major PPT

70.9

0.47

0.8

65.1

30.3

Minor 5ss

35.2

-1.7

2.9

41.4

37.8

Minor BPS

52.9

0.17

75.4

42.3

Associated Gene:

Gene:

ATP8B3

Ensembl Gene ID:

ENSAPLG00000012087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037466

1021039 - 1037084

16046

ENSAPLT00000012667

1021039 - 1037084

16046