Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_1028198_1029092_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1028198 - 1029092

Intron Length:

895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAACTTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTATTTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTT

Flanking Amino Acid:

KKCCINGTVYGLGTGRENKQ

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.2

79.1

37.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.7

0.74

80.7

36.7

Minor 5ss

57.6

0.26

2.5

76.6

38.7

Minor BPS

64.7

0.54

1.5

79.8

36.8

Associated Gene:

Gene:

ATP8B3

Ensembl Gene ID:

ENSAPLG00000012087

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037466

1021039 - 1037084

16046

ENSAPLT00000012667

1021039 - 1037084

16046