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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1031838_1032125_F


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1031838 - 1032125

Intron Length:
288

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCAGTGGA

5'SS Class:
major

3'SS Sequence:
GCCCATGTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTGAT

U12 Branch Point Sequence:
GGGGGCACAACA

Flanking Amino Acid:
KVWVLTGDKQETAMNIGYAC

Intron Amino Acid Position:
691

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1.3
72.4
39.5

Major BPS
71.2
0.53
1
61
37.5

Major PPT
68.1
0.41
1
60.4
40

Minor 5ss
27.5
-2.6
2.9
32.7
42

Minor BPS
39.3
-0.8
2.1
46.13
42.8

Associated Gene:

Gene:
ATP8B3

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1021039 - 1037084
16046

1021039 - 1037084
16046