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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1142169_1154681_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1142169 - 1154681

Intron Length:

12513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTTCT

5'SS Class:

major

3'SS Sequence:

TGTTTTTCGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

GCAAGAGTAACC

Flanking Amino Acid:

MAAPRRLFRGLDERPGSGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

72.3

40.1

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

75.5

0.57

73.9

36.8

Minor 5ss

-1

3.1

50.4

Minor BPS

38.1

-0.9

2.4

45.82

42.3

Associated Gene:

Gene:

TCF3

Ensembl Gene ID:

ENSAPLG00000001939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044569

1141534 - 1184951

43418

ENSAPLT00000002408

1141534 - 1184951

43418