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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1163176_1166308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1163176 - 1166308

Intron Length:

3133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAC

U12 Branch Point Sequence:

ATCACATGGAAG

Flanking Amino Acid:

RDTGMPGLNQTGFLPSEMGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.8

87.8

27.9

Major BPS

70.5

0.51

33.1

Major PPT

84.7

0.78

0.8

79.6

32.4

Minor 5ss

35.8

-1.6

3.3

48.1

47.6

Minor BPS

41.6

-0.8

1.9

44.98

40.5

Associated Gene:

Gene:

TCF3

Ensembl Gene ID:

ENSAPLG00000001939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044569

1141534 - 1184951

43418

ENSAPLT00000002408

1141534 - 1184951

43418