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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1166439_1167863_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1166439 - 1167863

Intron Length:

1425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCACACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTTCTTTCACA

Flanking Amino Acid:

PRRRGAESNIDGQPKKVRKV

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.8

76.2

39.9

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

80.5

0.69

0.8

76.5

31.1

Minor 5ss

34.6

-1.8

2.9

44.7

43.1

Minor BPS

75.9

0.81

1.6

86.93

31.8

Associated Gene:

Gene:

TCF3

Ensembl Gene ID:

ENSAPLG00000001939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044569

1141534 - 1184951

43418

ENSAPLT00000002408

1141534 - 1184951

43418