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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1167914_1172763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1167914 - 1172763

Intron Length:

4850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGCTCCTCACCC

Flanking Amino Acid:

RKVPPGLPSSVYPSNSGDDY

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

38.8

Major BPS

72.4

0.56

73.5

32.5

Major PPT

79.5

0.66

0.7

73.3

Minor 5ss

29.5

-2.3

2.7

34.5

Minor BPS

55.9

0.16

1.9

67.35

44.1

Associated Gene:

Gene:

TCF3

Ensembl Gene ID:

ENSAPLG00000001939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044569

1141534 - 1184951

43418

ENSAPLT00000002408

1141534 - 1184951

43418