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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1172867_1173121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1172867 - 1173121

Intron Length:

255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CCCCGCTCACCC

Flanking Amino Acid:

TVYPGAFYMADGLHNSPDLW

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

83.9

30.3

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

82.9

0.74

0.7

76.7

25.3

Minor 5ss

36.5

-1.5

2.9

49.7

46.6

Minor BPS

39.7

-0.8

2.1

43.27

44.5

Associated Gene:

Gene:

TCF3

Ensembl Gene ID:

ENSAPLG00000001939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044569

1141534 - 1184951

43418

ENSAPLT00000002408

1141534 - 1184951

43418