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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1173262_1173369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1173262 - 1173369

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACGTCC

5'SS Class:

major

3'SS Sequence:

CCCCTCTCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCTCCCTCACCC

Flanking Amino Acid:

FNSLHQHERMNYQLHSGEVN

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

60.1

39.7

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

77.2

0.61

0.8

68.4

31.9

Minor 5ss

43.7

-0.7

3.1

56.7

Minor BPS

49.1

-0

1.9

59.91

45.3

Associated Gene:

Gene:

TCF3

Ensembl Gene ID:

ENSAPLG00000001939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044569

1141534 - 1184951

43418

ENSAPLT00000002408

1141534 - 1184951

43418