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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1176260_1176724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1176260 - 1176724

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCGCTCCCTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

TATTTCTCCACC

Flanking Amino Acid:

PSYEGSLHTLQNKMEDRLDE

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

0.9

80.7

31.6

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

60.9

0.25

60.1

Minor 5ss

40.5

-1.1

3.4

59.8

Minor BPS

55.6

0.16

71.46

39.7

Associated Gene:

Gene:

TCF3

Ensembl Gene ID:

ENSAPLG00000001939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044569

1141534 - 1184951

43418

ENSAPLT00000002408

1141534 - 1184951

43418