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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1176929_1177747_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1176929 - 1177747

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CGTTCTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

CACCCCTCAAGG

Flanking Amino Acid:

MSLGSRHPSLVGGGHPEDGL

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

71.5

0.48

0.9

65.8

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

45.8

-0.4

1.9

46.11

46.1

Associated Gene:

Gene:

TCF3

Ensembl Gene ID:

ENSAPLG00000001939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044569

1141534 - 1184951

43418

ENSAPLT00000002408

1141534 - 1184951

43418