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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1177872_1178216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1177872 - 1178216

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

GCTTCCTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCAAC

U12 Branch Point Sequence:

CTCGCTCCAACC

Flanking Amino Acid:

DLSRPQDTYSGLSGGLGRSS

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

60.8

45.3

Major BPS

49.8

-0

1.2

34.3

Major PPT

0.45

65.6

Minor 5ss

30.6

-2.2

3.3

39.3

Minor BPS

-0.4

1.9

54.53

43.9

Associated Gene:

Gene:

TCF3

Ensembl Gene ID:

ENSAPLG00000001939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044569

1141534 - 1184951

43418

ENSAPLT00000002408

1141534 - 1184951

43418