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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1178365_1182318_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1178365 - 1182318

Intron Length:

3954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTCTTT

5'SS Class:

major

3'SS Sequence:

ATGAACCCAGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTATGAA

U12 Branch Point Sequence:

GTGCTATGAACC

Flanking Amino Acid:

KELKPSRNRTSTDEALSLED

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.1

67.9

39.8

Major BPS

63.1

0.33

1.1

55.4

40.3

Major PPT

56.8

0.15

49.4

39.4

Minor 5ss

43.3

-0.7

3.3

64.7

46.6

Minor BPS

48.2

-0.1

1.7

58.77

39.4

Associated Gene:

Gene:

TCF3

Ensembl Gene ID:

ENSAPLG00000001939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044569

1141534 - 1184951

43418