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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1194963_1294868_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1194963 - 1294868

Intron Length:

99906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTAGTC

5'SS Class:

major

3'SS Sequence:

CTGGAGAAACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACCAAT

U12 Branch Point Sequence:

GTGCCCTGGAGA

Flanking Amino Acid:

ARSYPTLDDEGRPTATSTHL

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

66.2

38.2

Major BPS

51.7

0.04

1.2

60.3

34.2

Major PPT

44.5

-0.3

1.1

32.1

39.2

Minor 5ss

33.7

-1.9

3.7

46.6

Minor BPS

47.7

-0.1

1.8

57.54

41.6

Associated Gene:

Gene:

PIP5K1C

Ensembl Gene ID:

ENSAPLG00000005085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005275

1140196 - 1303319

163124