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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1207305_1212394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1207305 - 1212394

Intron Length:

5090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TACGTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTCTACGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.74

0.8

80.5

36.8

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

45.4

-0.2

2.1

67.08

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044336

1206960 - 1218313

11354