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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1236266_1236917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1236266 - 1236917

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

GCCCGTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAA

U12 Branch Point Sequence:

GCGCCCTTAGGC

Flanking Amino Acid:

SMLEGHTARVGALAWNADQL

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

66.1

Major BPS

47.3

-0.1

50.8

30.3

Major PPT

67.7

0.4

59.4

40.7

Minor 5ss

31.8

-2.1

3.1

36.6

41.8

Minor BPS

47.1

-0.2

1.9

52.38

44.8

Associated Gene:

Gene:

FZR1

Ensembl Gene ID:

ENSAPLG00000005845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006105

1231955 - 1240247

8293

ENSAPLT00000030795

1231149 - 1240695

9547