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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1278854_1279104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1278854 - 1279104

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGCCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAACAC

U12 Branch Point Sequence:

AGAGGCTGACCG

Flanking Amino Acid:

KLEASGKGGPGERRDGVNAS

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.7

44.5

Major BPS

48.4

-0.1

1.2

55.1

40.5

Major PPT

70.8

0.47

64.6

36.4

Minor 5ss

38.8

-1.3

2.8

48.8

Minor BPS

39.2

-0.9

2.1

40.16

43.3

Associated Gene:

Gene:

CACTIN

Ensembl Gene ID:

ENSAPLG00000005461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005645

1276704 - 1290756

14053