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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1279478_1279559_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1279478 - 1279559

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

TCCTCTCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCTCCTCTCACC

Flanking Amino Acid:

DNFHLQQAKLRSKIRIRDGR

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

54.4

44.7

Major BPS

72.7

0.56

30.1

Major PPT

72.8

0.51

0.9

65.4

35.2

Minor 5ss

25.7

-2.8

3.2

30.9

43.1

Minor BPS

48.3

-0.1

2.1

64.24

41.6

Associated Gene:

Gene:

CACTIN

Ensembl Gene ID:

ENSAPLG00000005461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005645

1276704 - 1290756

14053