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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1280174_1280720_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1280174 - 1280720

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CACTCTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CTTCGTTTCATG

Flanking Amino Acid:

NLLGTFIWSKALEKKGISHL

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

75.8

0.58

0.9

72.3

37.4

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

44.2

-0.6

2.1

51.64

43.9

Associated Gene:

Gene:

CACTIN

Ensembl Gene ID:

ENSAPLG00000005461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005645

1276704 - 1290756

14053