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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1281208_1290721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1281208 - 1290721

Intron Length:

9514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGATTC

5'SS Class:

major

3'SS Sequence:

CCCCCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

CGATCGTCAACT

Flanking Amino Acid:

KMTCQSQTYTFSDSEDERHK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

70.7

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

70.5

0.46

0.7

64.4

Minor 5ss

45.1

-0.5

3.1

65.8

39.6

Minor BPS

49.4

0.04

2.3

69.99

46.3

Associated Gene:

Gene:

CACTIN

Ensembl Gene ID:

ENSAPLG00000005461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005645

1276704 - 1290756

14053