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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1295423_1296437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1295423 - 1296437

Intron Length:

1015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAATTTTAAAAT

Flanking Amino Acid:

HTWKALVHDGDTVSVHRPSF

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.6

0.64

0.8

73.2

31.6

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

53.3

0.18

1.7

70.66

40.2

Associated Gene:

Gene:

PIP5K1C

Ensembl Gene ID:

ENSAPLG00000005085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005275

1140196 - 1303319

163124